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Definition of Synaptonemal complex

Medically reviewed by Dr. Otari Nergadze, Neurosurgeon | Updated: January 2026

Synaptonemal complex: A protein structure that forms between two homologous chromosomes during meiosis and that is thought to mediate chromosome pairing, synapsis, and recombination. The synaptonemal complex is a tripartite structure consisting of two parallel lateral regions and a central element. Three specific components of the synaptonemal complex have been characterized: SC protein-1 (SYCP1), SC protein-2 (SYCP2), and SC protein-3 (SYCP3). The SYCP1 gene is on chromosome 1p13; the SYCP2 gene is on chromosome 20q13.33; and the gene for SYCP3 is on chromosome 12q.